diff --git a/README.md b/README.md index 35b441f..a68202e 100644 --- a/README.md +++ b/README.md @@ -81,8 +81,8 @@ Maps C++ symbols (qualified names or `file.cpp:line` references) to the papers they implement. The workflow: 1. Tag C++ source with `@cite ` in Doxygen comments. -2. Run `codex provenance sync --lib-path ` to scan and resolve tags. -3. Run `codex provenance export-bib ` to generate a `.bib` file +2. Run `codex provenance scan --lib-path ` to scan and resolve tags. +3. Run `codex provenance bib ` to generate a `.bib` file containing **only the cited subset** of your collection. The exported `.bib` is a derived view of the master catalogue — regenerate @@ -97,8 +97,8 @@ codex ingest # ingest one paper by arXiv ID or DOI codex ingest-file # bulk ingest from a file of IDs codex search "" [--hybrid] codex discover leads -codex provenance sync --lib-path -codex provenance export-bib +codex provenance scan --lib-path +codex provenance bib codex ask "" # optional LLM Q&A via Ollama ```