Commit Graph

4 Commits

Author SHA1 Message Date
Tarik Moussa
a5718c0326 fix(coverage+validation): C2/C3 script gate, V1/V2/V4 JSON/XML errors, I2/I3/I4 tests
C2: Fix coverage.sh — remove || true from lcov capture/extract steps so real
    lcov failures are visible; empty coverage.info now exits with code 3.
C3: Add coverage gate to quality-gates CI job (SKIP_COVERAGE_GATE=1 ramp-up
    mode until I5 is resolved — fast suite covers ~9.6% not 80%). Thresholds:
    80% line / 70% branch / 90% function (agreed 2026-05-31).

V1: Wrap JSON parse + field extraction in try/catch — nlohmann parse_error and
    type_error now surface as std::runtime_error with the file path.
V2: Wrap stoi/stod in XML Solver parser — missing/non-numeric attributes throw
    std::runtime_error instead of leaking std::invalid_argument.
V4: Validate required JSON keys (dof_vector, solver, solver.*) before access —
    missing field produces a clear named-field error message.

I2: 6 serialization negative tests (missing file, malformed JSON, missing
    dof_vector, missing solver block, missing XML file, non-numeric XML attr).
I3: load_mesh throws on non-triangulated (quad) mesh — covers the
    is_triangle_mesh guard that was previously untested.
I4: spherical_hessian throws on edge DOFs — covers the logic_error guard.

290/290 tests pass (+8 new).

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
2026-05-31 19:44:39 +02:00
Tarik Moussa
65fc8ac816 refactor(api): consistent naming for spherical + hyper-ideal helpers (A1–A3)
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C++ Tests / test-fast (pull_request) Successful in 2m20s
C++ Tests / quality-gates (pull_request) Has been skipped
C++ Tests / test-cgal (pull_request) Has been skipped
Standardize the low-level free-function API on <verb>_<geom>_<rest>,
matching the already-consistent setup_<geom>_maps. Old names kept as
[[deprecated]] inline aliases for one release; all internal call sites
migrated.

Renames:
  assign_vertex_dof_indices      -> assign_spherical_vertex_dof_indices
  assign_all_spherical_dof_indices -> assign_spherical_all_dof_indices
  assign_all_dof_indices         -> assign_hyper_ideal_all_dof_indices
  compute_lambda0_from_mesh      -> compute_spherical_lambda0_from_mesh
  gradient_check                 -> gradient_check_hyper_ideal

A4/A5 (public CGAL API) intentionally deferred pending the license/
provenance decision (see CGAL submission audit G0/G1).

Verified: 277/277 CGAL tests pass, no deprecation warnings.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
2026-05-31 10:37:06 +02:00
Tarik Moussa
d3c08b3bc0 quality: 2 new gates (cmake-format, codespell) + SPDX rollout (60 files)
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C++ Tests / test-fast (pull_request) Successful in 2m2s
API Docs / doc-build (pull_request) Successful in 58s
Markdown link check / check (pull_request) Successful in 45s
C++ Tests / test-cgal (pull_request) Failing after 13m14s
This commit closes the remaining red gates so `run-all.sh --fast` is
green end-to-end on the canonical dev machine.

New gates
─────────
1. cmake-format / cmake-lint
   * scripts/quality/cmake-format.sh — dry-run by default,
     --strict to fail on drift, --fix to apply
   * .cmake-format.yaml — policy (lowercase commands, UPPERCASE
     keywords, 100-col loose limit; matches .clang-format choices)
   * Uses the pip-installed `cmakelang` package
     (`pip3 install --user cmakelang`)

2. codespell
   * scripts/quality/codespell.sh — exit 1 on any typo, --fix
     interactively
   * .codespellrc — extensive ignore-words-list capturing the
     project's British-English-leaning style (centre, behaviour,
     specialise, normalise, …) plus domain abbreviations (DOF,
     iff, fuchsiens), so the gate flags real typos only.
   * Validated: 0 typos across docs + code/include + scripts +
     code/{src,tests}.

SPDX rollout (license-headers --fix)
────────────────────────────────────
license-headers.sh gained a --fix mode that auto-inserts the
two-line header at the correct place (below `#pragma once` if
present, above the include guard otherwise, plain prepend for
.cpp).  Ran it on 60 of 66 files — 100 %-licensed now.

Verified the build is still clean after the textual edits:
   cmake -S code -B build-verify -DWITH_CGAL_TESTS=ON
   ctest --test-dir build-verify   → 257/257 PASS

run-all.sh + README updated to include the two new gates.

End-to-end style/convention block status (on this commit, this branch):

    license-headers     (66/66 carry MIT SPDX)
    cgal-conventions    (0/6 violations)
    clang-format        (0 drift; warn-mode for safety)
    cmake-format/-lint  (warn-mode for safety)
    codespell           (0 typos)
    markdown-links      (122/122 resolve)

The slow correctness/quality block (sanitizers, coverage, clang-tidy,
multi-compiler, cgal-version-matrix, reproducible-build) is left as
follow-up — toolchain is now installed locally, scripts are syntax-
clean, the slow runs themselves are a separate matter of patience.

Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com>
2026-05-24 09:15:34 +02:00
Tarik Moussa
194effba97 feat(phase3f+3g): analytical Hessians + PI consolidation
Phase 3g — constants.hpp:
  - Introduce conformallab::PI and TWO_PI in a single constants.hpp
  - Remove scattered local PI/pi definitions from hyper_ideal_geometry.hpp,
    hyper_ideal_utility.hpp, euclidean_functional.hpp, mesh_builder.hpp,
    spherical_geometry.hpp (backward-compatible PI_SPHER alias kept)

Phase 3f — Euclidean Hessian (euclidean_hessian.hpp):
  - Cotangent-Laplace operator (Pinkall–Polthier 1993)
  - euclidean_cot_weights() helper + euclidean_hessian() + hessian_check_euclidean()
  - Correct Pinkall–Polthier 1/2 normalization factor
  - 8 tests: cot weights, symmetry, null-space (H·1=0), PSD, FD × 4 meshes

Phase 3f — Spherical Hessian (spherical_hessian.hpp):
  - Derives ∂α_i/∂u_j directly from the spherical law of cosines:
      ∂α1/∂l_opp  = sin(l_opp) / [sin(l_a)·sin(l_b)·sin(α1)]
      ∂α1/∂l_adj  = [cot(l_adj)·cos(α1) − cot(l_other)] / sin(α1)
    then chains with ∂l/∂λ = tan(l/2)
  - spherical_cot_weights() kept as a standalone helper (tested separately)
  - 8 tests: cot weights, symmetry, correct null-space & sign-convention
    (H·1 ≠ 0; H is NSD at equilibrium), FD × 3 meshes

All 62 cgal tests pass (3 skipped as before).

Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com>
2026-05-12 17:22:28 +02:00