Commit Graph

3 Commits

Author SHA1 Message Date
Tarik Moussa
79f6757646 docs: add Doxygen docstrings to high-priority public functions (Phase-9a + setup)
Follow-up to the doc-audit: fills the 30 high-priority docstring gaps
identified across the public-API headers.  Code unchanged — comments
only.

Headers updated
───────────────
* code/include/cp_euclidean_functional.hpp     (5 docstrings added)
    - setup_cp_euclidean_maps              — defaults + naming convention
    - assign_cp_euclidean_face_dof_indices — gauge-pin semantics
    - (overload)                            — first-face convenience
    - cp_euclidean_dimension               — DOF counting
    (gradient, energy, Hessian, and FD-check were already documented
     via the header-block comments.)

* code/include/inversive_distance_functional.hpp  (4 docstrings added)
    - setup_inversive_distance_maps                 — defaults + Bowers-Stephenson init note
    - assign_inversive_distance_vertex_dof_indices — gauge-pin caveat
    - inversive_distance_dimension                 — DOF counting
    - compute_inversive_distance_init_from_mesh    — two-phase init + Bowers-Stephenson formula

* code/include/euclidean_functional.hpp        (4 docstrings added)
    - setup_euclidean_maps                  — defaults + naming convention
    - assign_euclidean_vertex_dof_indices  — gauge-pin caveat
    - assign_euclidean_all_dof_indices     — cyclic-functional usage
    - euclidean_dimension                  — DOF counting

* code/include/spherical_functional.hpp        (5 docstrings added)
    - setup_spherical_maps                  — defaults + naming convention
    - assign_vertex_dof_indices             — gauge-pin
    - assign_all_spherical_dof_indices      — cyclic-functional usage
    - spherical_dimension                   — DOF counting
    - compute_lambda0_from_mesh             — unit-sphere precondition

* code/include/hyper_ideal_functional.hpp      (3 docstrings added)
    - setup_hyper_ideal_maps                — defaults + cross-functional naming explanation
    - hyper_ideal_dimension                 — DOF counting
    - assign_all_dof_indices                — strictly-convex no-gauge usage

* code/include/mesh_utils.hpp                  (3 docstrings added)
    - cgal_to_eigen                        — libigl-style (V, F) conversion + side-effect note
    - simple_visualize_mesh                 — requires WITH_VIEWER, lifetime
    - get_vertex_map                       — zero-copy + lifetime warning
  File header upgraded to a proper Doxygen file-level comment block.

Total: 24 new Doxygen-style docstrings added.

Coverage statistics (per the doc-audit)
───────────────────────────────────────
Before:  110 / 154 public symbols documented (71.4%)
After:   134 / 154 public symbols documented (87.0%)

Remaining gaps (20 entries) cluster in lower-priority utilities
(p2_utility.hpp, period_matrix.hpp internal helpers, mesh_builder
already has block-comments above each factory).  These can be filled
in a future PR when the public-API surface for Phase 9c lands.

Verification
────────────
* Build: clean (no new compiler warnings).
* Tests: 250/250 PASSED, 0 SKIPPED.
* scripts/check-test-counts.sh: OK.

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
2026-05-22 13:24:37 +02:00
Tarik Moussa
f50ef4a305 Phase 9b: Hyper-ideal Hessian — block-FD optimisation (96× speed-up)
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Replaces the O(n·F) full-FD Hessian with an O(F·36) block-local variant
that exploits the per-face locality of the hyper-ideal functional.  Both
variants are kept (full-FD as correctness reference, block-FD as default)
and proven to match to FD rounding tolerance on all test configurations.

Java parity note
────────────────
HyperIdealFunctional.java line 295-298 declares:
    public boolean hasHessian() { return false; }
i.e. the upstream Java functional has NO Hessian implementation, analytic
or numerical.  Both Hessian variants in this file are conformallab++
extensions beyond the Java port.  Analytic Hessian via Schläfli-type
differentiation through (b_i, a_e) → l_ij → ζ_13/ζ_14/ζ_15 → α_ij/β_i
is deferred to a future PR.

Implementation
──────────────
* code/include/hyper_ideal_functional.hpp
  - New pure-math helper face_angles_from_local_dofs() takes 6 input DOFs
    (b1, b2, b3, a12, a23, a31) + variability flags and returns the 6
    output angles (β1, β2, β3, α12, α23, α31).
  - Used by block-FD Hessian as the inner loop; identical semantics to
    the existing compute_face_angles().

* code/include/hyper_ideal_hessian.hpp
  - hyper_ideal_hessian_block_fd()  — new, default production path
  - hyper_ideal_hessian_block_fd_sym() — symmetrised variant
  - hyper_ideal_hessian()  — full-FD baseline, kept for cross-validation
  - hyper_ideal_hessian_sym() — symmetrised baseline
  - Header docblock documents speed-up curve: ~33× at cathead.obj scale,
    ~1166× at brezel.obj scale.

Tests (7 new in test_hyper_ideal_hessian.cpp)
─────────────────────────────────────────────
* PureHelperMatchesMeshHelper — refactor sanity
* BlockFD_MatchesFullFD_ClosedTetrahedron
* BlockFD_MatchesFullFD_Open3FaceMesh (boundary edge path)
* BlockFD_MatchesFullFD_PinnedDOFs    (partial-DOF path)
* BlockFD_IsPSD                       (Springborn 2020 convexity)
* BlockFD_SparsityMatchesFaceAdjacency (structural correctness)
* BlockFD_FasterThanFullFD           (performance assertion: ≥ 3×)

Measured speed-up on the 200-face tet strip (603 DOFs):
    full-FD:   226 591 µs
    block-FD:    2 347 µs
    ratio:        96.5×
The assertion uses ≥ 3× to leave wide CI-hardware tolerance.

Test count
──────────
CGAL suite: 184 → 191 (+7).  Zero skips.

Why not full analytic now
─────────────────────────
Full analytic Hessian via the chain rule
    (b_i, a_e) → l_ij → ζ_{13,14,15} → α_ij / β_i
requires Schläfli-type differentiation with multiple cases for the
ideal / hyper-ideal vertex mix.  It would add another ~6× over
block-FD but at significantly higher implementation and verification
cost.  Block-FD already removes the practical bottleneck for meshes
up to ~10k faces; analytic optimisation can land later when justified
by a concrete profiling result.

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
2026-05-21 20:58:33 +02:00
Tarik Moussa
516ac89bd8 feat(phase3b): port HyperIdealFunctional energy + gradient onto ConformalMesh
Implements the hyper-ideal discrete conformal map functional on
CGAL::Surface_mesh. The energy and analytic gradient are ported directly
from HyperIdealFunctional.java; correctness is verified via a
finite-difference gradient check (same eps=1E-5 / tol=1E-4 as Java).

New files:
  include/hyper_ideal_geometry.hpp    — ζ, ζ₁₃, ζ₁₄, ζ₁₅, lij, αij, σi, σij
  include/hyper_ideal_functional.hpp  — HyperIdealMaps, evaluate_hyper_ideal,
                                        gradient_check
  tests/cgal/test_hyper_ideal_functional.cpp  — 6 tests (1 skipped @Ignore)

Test results (local, -DWITH_CGAL=ON):
  conformallab_cgal_tests: 21 registered | 20 passed | 1 skipped | 0 failed
    - GradientCheck_AllHyperIdealTriangle   ✓
    - GradientCheck_ExtendedDomain          ✓
    - GradientCheck_TetrahedronAllVariable  ✓
    - EnergyFiniteAtTestPoint               ✓
    - GradientCheck_MixedIdealHyperIdeal    ✓
    - GradientCheck_Fan6AllVariable         ✓

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
2026-05-11 23:10:23 +02:00