New .gitea/workflows/doxygen-pages.yml runs on every push to main that
touches the public headers, Doxyfile, the markdown-link filter, any
doc/**/*.md, README.md, or the workflow itself. It reuses the existing
ci-cpp container image and the existing CODEBERG_TOKEN secret already
used by mirror-to-codeberg.yml — no new secret setup needed.
The job force-pushes an orphan commit to the `pages` branch on
codeberg.org/TMoussa/ConformalLabpp, which Codeberg Pages serves from
https://tmoussa.codeberg.page/ConformalLabpp/ (verified live).
README.md gains a Doxygen badge and a Documentation table row pointing
at the Pages URL. locked-vs-flexible.md (the reviewer-facing doc) is
updated to mention the Pages URL next to the Doxygen-coverage gap.
Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com>
Follow-up to the test-count centralisation + release-policy commit:
applies the findings of the parallel doc-audit.
Stale claims fixed
──────────────────
* CLAUDE.md line 14-17 (phase block summary): expanded from
"Phase 1-7 done, 8-9 planned, 10+ research" to reflect that
Phase 8a MVP + 8b-Lite + 9a + 9b are now done (v0.9.0), with
Phase 9b-analytic + 9c as the next planned milestones.
* CLAUDE.md line 251-252 (release state): "v0.7.0 ... Phase 7 next"
→ "v0.9.0 ... Phase 9c + 9b-analytic next".
* CLAUDE.md "Three geometry modes" → "Five DCE models" table.
Adds CP-Euclidean and Inversive-Distance rows with their CGAL
public entries. DOF-assignment pattern subsection rewritten to
cover vertex-only / vertex+edge / face-based assignments.
* CLAUDE.md "Newton solver" section: gradient sign and Hessian
convention for all five solvers (was: three). Replaces the
"Hessian is FD" claim for HyperIdeal with the block-FD note
(Phase 9b shipped).
* CLAUDE.md "Known quirks": stale GTEST_SKIP entry removed (v0.9.0
cleaned up the HDS-port stubs).
* README.md line 86: "all 24 headers with descriptions" →
"all public headers with descriptions" (was undercounting).
Missing entries added — `doc/api/headers.md`
─────────────────────────────────────────────
* New section **"Circle-packing functionals (Phase 9a)"** with
`cp_euclidean_functional.hpp` and `inversive_distance_functional.hpp`.
* New section **"Math utilities"** documenting four previously-
undocumented public helpers: `matrix_utility.hpp`,
`projective_math.hpp`, `p2_utility.hpp`, `discrete_elliptic_utility.hpp`.
* New section **"CGAL public API (Phase 8b-Lite)"** documenting all
six new public headers under `include/CGAL/`.
* `newton_solver.hpp` row expanded to list all five Newton functions.
Header count summary (before vs after):
* Before: 24 headers in 8 sections (missing 6 of the 30 actually present).
* After: 30 headers in 11 sections (complete coverage).
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
Two complementary improvements aimed at reducing recurring maintenance
overhead:
1. **Test-count centralisation** — `doc/api/tests.md` is now the
single source of truth for the test counts. All other docs
(README, CLAUDE.md, doc/contributing.md, doc/getting-started.md,
doc/math/validation.md, doc/math/validation-protocol.md,
scripts/try_it.sh) use qualitative phrasing + a link instead of
hardcoded numbers. The previous regime had eight places with
"227 CGAL tests, 23 non-CGAL tests" that drifted apart across
releases (the v0.9.0 release-prep needed to touch nine files).
2. **Versioning policy** — `doc/release-policy.md` (new, ~250 lines)
formalises:
* SemVer rules for the pre-1.0 and post-1.0 phases.
* Phase-milestone → MINOR-bump mapping (v0.10.0 → Phase 9c, …).
* Single-source-of-truth table for moving numbers (test counts,
version, date).
* Step-by-step release process (the recipe that worked for v0.9.0
after the false-start with PR #11/#12).
* Hotfix policy + post-1.0 deprecation policy.
* Known failure modes and how to recover from them.
Plus a small CI gate:
3. **scripts/check-test-counts.sh** — verifies the totals in
doc/api/tests.md match `ctest` output. Re-uses existing build-cgal/
if present. Exit 0 on match, 1 on divergence with recovery hints.
Cheap enough (~30 s) to run on every PR.
Other cleanups
──────────────
* code/tests/cgal/CMakeLists.txt — stale "Test 7 (genus-2 homology)
as GTEST_SKIP stub until Phase 8" comment removed; that test landed
as HomologyGenerators.Genus2_FourCutEdges in Phase 7.
* CLAUDE.md — "test-fast also runs stubs" Known Quirks entry updated
to reflect the v0.9.0 stub cleanup (no GTEST_SKIPs remain).
* CLAUDE.md doc map — new entry for doc/release-policy.md.
Stubs audit
───────────
Zero GTEST_SKIP() calls remain in the codebase as of this commit.
The only references to stubs are in historical documentation
(CHANGELOG.md v0.7.0 entry, doc/roadmap/* "deferred to research-track"
notes) — those are intended.
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
Closes the v0.9.0 release loop on top of Phase 9a-Newton + Phase 8b-Lite:
* CHANGELOG.md (NEW) — Keep-A-Changelog format, with v0.9.0 entry
detailing all Phase 9a / 9b / 8b-Lite contents and the doc-audit
corrections that landed via PR #10.
* CITATION.cff — version 0.7.0 → 0.9.0, date 2026-05-18 → 2026-05-22.
* Stale HDS-port stubs removed (13 GTEST_SKIPs total):
- code/tests/test_spherical_functional.cpp
- code/tests/test_hyper_ideal_functional.cpp
- code/tests/test_hyper_ideal_hyperelliptic_utility.cpp
These referenced a "HDS port (Phase 4)" that never happened —
CoHDS was intentionally replaced by CGAL::Surface_mesh, and the
functional tests live in code/tests/cgal/test_*_functional.cpp.
* Test-count updates everywhere:
- Non-CGAL 36 → 23 (drop = 13 deleted stubs)
- CGAL 176 → 227
- Total 212 → 250 (+38 net, 0 skipped)
Files: README.md, CLAUDE.md, CHANGELOG.md, scripts/try_it.sh,
doc/api/tests.md, doc/contributing.md, doc/getting-started.md,
doc/math/validation.md.
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
A full audit of `doc/` plus root-level markdown files (27 files) against
the actual ground truth in the C++ code and the local Java repository at
`/Users/tarikmoussa/Desktop/conformallab/` revealed four pre-existing
mis-labels and a stale test count. All are corrected here.
Audit findings — corrected
─────────────────────────
1. **`InversiveDistanceFunctional` mis-labelled as Java port** (4 doc sites)
Empirical verification:
find /Users/tarikmoussa/Desktop/conformallab -iname "*nversive*"
(zero matches)
The class does NOT exist in `de.varylab.discreteconformal`. The C++
implementation is built from Luo 2004 + Glickenstein 2011 + Bowers-
Stephenson 2004 — new research, not a port.
Fixed in: java-parity.md, references.md, add-inversive-distance.md.
2. **HyperIdeal Hessian mis-labelled as "Java has analytic Hessian"**
Empirical verification: `HyperIdealFunctional.java:295-298`:
public boolean hasHessian() { return false; }
Java has NO Hessian at all. Both the FD (Phase 4a) and the block-FD
(Phase 9b) Hessians in C++ are research beyond the Java port. The
chain rule (b,a) → ℓ → ζ → α/β is the *mathematical formulation*
from Springborn 2020, not something Java implements.
Fixed in: java-parity.md.
3. **Stale test count** README:87 said "28 suites, 170 tests" — current
actual is 35 suites, 176 CGAL + 36 non-CGAL. Fixed.
4. **Tutorial framing** — `add-inversive-distance.md` was framed as
"porting an InversiveDistanceFunctional.java" that does not exist.
Rewritten as "Implementing the Inversive-Distance functional from
Luo 2004" with prominent verification block at top.
New document: `doc/roadmap/research-track.md`
─────────────────────────────────────────────
Consolidates everything in conformallab++ that goes beyond a Java port:
* Items already on `main`: HyperIdeal FD Hessian, period matrix τ
partial-research components, Möbius holonomy storage.
* Items on open PRs: CP-Euclidean (PR #8, port), Inversive-Distance
(PR #8, research), block-FD Hessian (PR #9, research).
* Planned research with full citations:
- **Phase 9b-analytic** — full analytic HyperIdeal Hessian via
Schläfli identity (Schläfli 1858/60) and chain rule through
ζ₁₃/ζ₁₄/ζ₁₅, citing Springborn 2020 §4, Cho-Kim 1999,
Glickenstein 2011 §4. Includes acceptance-criteria checklist
(per-case derivative cross-checks, gauge null space, PSD,
measured ≥ 3× speed-up, LaTeX correctness note).
- **Phase 9a.2-analytic** — analytic inversive-distance Hessian
via Glickenstein 2011 eq. (4.6).
- **Phase 10c** — full uniformization for genus g ≥ 2 (Fuchsian
group representation) — fully new research, no Java reference.
- **geometry-central** GC-1/2/3 exploratory track.
* Java backlog summary: 11 worth-porting Java classes identified by
the parallel survey (FundamentalPolygonUtility, DiscreteHarmonicForm-
Utility, DiscreteHolomorphicFormUtility, CanonicalBasisUtility,
HyperbolicCyclicFunctional, QuasiisothermicUtility, KoebePolyhedron, …).
~6 500 Java lines, ~5 months of porting work, organised by phase.
Updated documents
─────────────────
* CLAUDE.md
- New "Port-vs-research maintenance rule" with empirical verification
command and the four corrected mis-labels.
- Doc map: 23 → 24 documents (research-track.md added).
* README.md
- Test count corrected (170 → 176+36).
* doc/math/references.md
- Luo 2004 entry corrected ("new research" instead of "not yet ported").
- New entries for Bowers-Stephenson 2004, Glickenstein 2011,
Bobenko-Pinkall-Springborn 2010, Schläfli 1858/60.
* doc/roadmap/phases.md
- Phase 9 reorganised: 9a split into 9a.1 (port) / 9a.2 (research),
9b clarified as research (Java has no Hessian), 9c expanded with
Java line counts and effort estimates.
- Phase 10 reorganised: 10a/10b/10c with their Java prerequisites
explicitly listed; 10c flagged as "fully new research".
- Phase 10b' added: parallel research track (hyperbolic functional,
quasi-isothermic, Möbius centering).
- Phase 10c' added: optional Java-port additions (Koebe, circle
patterns, electrostatic sphere).
* doc/roadmap/java-parity.md
- Inversive-distance row: ❌ Java, ❌ C++ (Phase 9a.2) — new research.
- CP-Euclidean row added: ✅ Java, ❌ C++ (Phase 9a.1) — port.
- HyperIdeal Hessian row: ❌ Java, ⚠️ FD + block-FD in C++.
- Worth-porting table replaced with the survey results (12 classes,
Java line counts, suggested phases).
- "HyperIdeal Hessian: FD vs analytic" section rewritten with the
correction notice.
* doc/tutorials/add-inversive-distance.md
- Rewritten end-to-end with prominent verification block at top.
- Now correctly framed as "Implementing the Inversive-Distance
functional from Luo 2004" — research, not port.
- Includes the four required cross-validations:
limit cases, Bowers-Stephenson round-trip, FD-vs-analytic,
cross-validation against euclidean_functional at u=0.
- New "How to know if it's a port or research" closing section
with the empirical verification command.
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
doc/concepts/declarative-pipeline.md — vollständige Design-Spezifikation:
1. Kernidee: Processing Units mit expliziten require/provide-Contracts
2. Token-Vokabular: 30 Tokens in 7 Kategorien
input, setup, Gauss-Bonnet, solver, topology, layout, period/domain/output
3. YAML-Schema: Vollständige Syntax inkl. Parameterdefaults aller Units
4. Validierungsalgorithmus: monoton wachsendes provided-Set, Pre-Execution-Check
5. 5 vollständige Beispiele:
A — Euklidische Uniformisierung Torus (τ-Ausgabe)
B — Sphärische Uniformisierung (cathead.obj)
C — Hyperbolische Uniformisierung Torus (Poincaré-Disk)
D — Volle Pipeline mit Periodenmatrix + 5×5-Kachelung
E — Absichtlich fehlerhaftes Beispiel mit Validator-Fehlermeldungen
6. C++-Mapping: alle YAML-Unit-Namen → C++-Funktionen + Header
7. Implementierungsplan (Phase 8e): pipeline.hpp + CLI-App + YAML-Abhängigkeit
8. Design-Entscheidungen: YAML vs. JSON/TOML, explizit vs. auto-inference,
linear vs. DAG, eine Geometrie pro Datei
doc/api/cgal-package.md: Link zum Konzeptdokument ergänzt.
README.md: Link in Dokumentationstabelle ergänzt.
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
Ziel: einem interessierten Mathematiker ermöglichen, die bisherige Arbeit
unabhängig zu validieren und eigene Forschung beizutragen.
Neu:
doc/math/discrete-conformal-theory.md
Kompakte mathematische Einführung (DCE, Variationsprinzip, drei
Geometriemodi, Holonomie, Periodenmatrix) für Riemann-Flächen-Kenner.
doc/math/validation.md
Analytisch bekannte Sollwerte + wie man sie mit dem Code prüft:
Gauss–Bonnet (χ), τ ∈ Fundamentaldomäne (3 Invarianten), Symmetrie-
Argumente für τ=i (4-fach) und τ=e^{iπ/3} (6-fach), Newton-Konvergenz,
Gradienten-Check (FD), Holonomie-Kommutator. Reviewer-Checkliste.
CONTRIBUTING.md (Root)
Gitea/GitHub-Standard: CONTRIBUTING.md im Root-Verzeichnis als
Kurzreferenz mit Links zu doc/contributing.md und den Math-Docs.
code/data/off/torus_4x4.off — 16 Vertices, 32 Flächen, Genus 1
code/data/off/torus_8x8.off — 64 Vertices, 128 Flächen, Genus 1
code/data/off/torus_hex_6x6.off — 36 Vertices, 72 Flächen, 6-fach Sym.
Aktualisiert:
README.md — 158 → 170 Tests, zwei neue Math-Links in Tabelle
doc/api/tests.md — 28 Suiten, 170 Tests, 1 Skip (korrigiert)
doc/contributing.md — Testzähler 158+2 → 170+1
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
README.md: reduced from 703 to ~75 lines — what/why, status, quick
start, minimal usage example, navigation table to doc/ files.
doc/architecture/overall_pipeline.md: trimmed — roadmap, extension
points, declarative pipeline YAML, and references sections removed
(each now has its own dedicated file). Replaced with a link table.
New files:
doc/getting-started.md — build modes, single-test invocation, CLI
doc/api/pipeline.md — full pipeline API with code for all 3 geometries
doc/api/extending.md — new functionals, geometry modes, Java porting guide
doc/api/contracts.md — processing unit preconditions/provides table
doc/api/cgal-package.md — Phase 8 CGAL package design + YAML pipeline (TODO)
doc/math/geometry-modes.md — Euclidean/Spherical/HyperIdeal comparison
doc/math/references.md — all papers by module
doc/roadmap/phases.md — Phases 1–10 with porting/research boundary
doc/roadmap/java-parity.md — Java vs C++ feature parity table
doc/contributing.md — language policy, test standards, release flow
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
Root cause: -DWITH_CGAL=ON implied -DWITH_VIEWER=ON, which pulled in
GLFW, which requires wayland-scanner — not present in the headless CI
container (ubuntu:22.04 ARM64).
Fix: new CMake option -DWITH_CGAL_TESTS=ON builds conformallab_cgal_tests
without touching the viewer, GLFW, libigl, or any display dependency.
Only Boost headers are required (already in the Docker image).
Changes
───────
code/CMakeLists.txt
- Add WITH_CGAL_TESTS option (OFF by default)
- find_package(Boost REQUIRED) now shared between WITH_CGAL and WITH_CGAL_TESTS
- WITH_CGAL still implies WITH_VIEWER (for local full builds)
- Remove duplicate find_package(Boost) inside the WITH_CGAL block
code/tests/CMakeLists.txt
- cgal/ subdirectory added for WITH_CGAL OR WITH_CGAL_TESTS
.gitea/workflows/cpp-tests.yml
- test-cgal job: -DWITH_CGAL=ON → -DWITH_CGAL_TESTS=ON
README.md
- Build modes table: three rows (default / CGAL_TESTS / CGAL full)
- Quick-start: separate headless and full-local sections
- Prerequisite table updated
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
Structured the development roadmap into four blocks with an explicit
boundary marker separating direct Java ports (Phase 1–7) from
infrastructure (Phase 8), remaining porting (Phase 9), and new
research territory (Phase 10+).
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
README:
- Neuer Einstieg mit vollständiger Dissertation-Referenz (Titel, TU Berlin 2016,
DOI 10.14279/depositonce-5415, CC BY-SA 4.0)
- Links zu Original-Java-Repo, sechel.de und linkedin.com/in/sechel
- Neuer Abschnitt "Ursprung & Danksagung" vor der Lizenz
doc/architecture/overall_pipeline.md:
- Neuer "Origin"-Abschnitt ganz oben mit vollständiger Quellenangabe
- Literaturabschnitt erweitert: Dissertation als "Primary source" hervorgehoben,
Java-Original-Repo als direkter Port-Bezug dokumentiert
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
Mark all Phase 3 sub-phases (3a–3g) as done in the roadmap.
Add euclidean_hessian and spherical_hessian to the feature table.
Update status banner: 62 tests, Phase 4 is next.
Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com>
Six concrete next steps toward Phase 3 completion and Phase 4 (solver):
3d EuclideanCyclicFunctional — most critical missing functional
3e Spherical gauge-fix (1D Brent along additive u constant)
3f Analytic Hessian via CGAL::Weights::cotangent_weight()
3g Consolidate duplicate PI constant
4a Minimal Newton solver with Eigen SimplicialLDLT
4b CGAL::IO read/write OBJ for mesh round-trip testing
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
