ROOT CAUSE FIX
The Doxyfile EXCLUDE_PATTERNS line contained `*/* 2.hpp` (note the
space — a stray glob from macOS-style "foo 2.hpp" duplicate files).
That pattern was silently matching ALL .hpp / .h files, so Doxygen was
indexing nothing under code/include/. The pre-existing 556 KB of HTML
output was effectively documenting only README.md, CLAUDE.md and a
small stub for std:: — not the C++ API at all.
After fixing the pattern (and properly escaping the space-prefixed
"foo 2.hpp / foo 2.h" macOS-dup patterns), Doxygen now extracts 141
compounds and emits 248 HTML pages from the public headers.
WHAT THIS PR ADDS
1. Doxyfile fix: correct EXCLUDE_PATTERNS; add GENERATE_XML for the
coverage measurement script; add MathJax for `$$...$$` math in
markdown; add the missing CGAL `\cgalParamNBegin/End/Description/
Default/...` aliases so CGAL-style param blocks render correctly.
2. New headers:
- code/include/CGAL/Conformal_map/doxygen_groups.h
defines `PkgConformalMap{,Ref,Concepts,NamedParameters}`,
resolving 17 prior "non-existing group" warnings.
- code/include/CGAL/Conformal_map/doxygen_namespaces.h
gives every namespace under `CGAL::` and `conformallab::` a
brief description.
3. New tool: scripts/doxygen-coverage.sh
Parses the XML output and reports % of public symbols (excluding
the `detail::` implementation namespaces by default) that have a
non-empty brief/detailed description. Supports `--list-undoc`
and `--threshold N` for CI integration.
4. Substantial docstring additions to the public CGAL headers:
`Conformal_map_traits.h`, `Discrete_circle_packing.h`,
`Discrete_inversive_distance.h`, `conformal_mesh.hpp`,
`Discrete_conformal_map.h` (Hyper_ideal_map_result fields).
5. Markdown housekeeping that the strict-warning Doxygen run surfaced:
tests.md (escape literal `#` in table cell),
locked-vs-flexible.md (broken section anchor),
overall_pipeline.md (replace `$$LaTeX$$` with inline-unicode math).
CURRENT NUMBERS
before: ~24% documented (public API; the prior "87%" claim was
based on the broken extraction)
after: 42% documented (165 of 396 public symbols)
warnings: 0 (was 27 spurious + a flood of bogus undocumented
warnings hidden by the buggy EXCLUDE pattern)
NEXT (in a follow-up commit on this branch)
The remaining 231 public symbols (mostly in `layout.hpp`,
`hyper_ideal_functional.hpp`, `spherical_functional.hpp`, the per-mode
functional/Hessian files) can be brought to ~100% with another pass of
short `///` brief descriptions. The coverage script is the gate; CI
can begin enforcing `--threshold 95` once the next pass lands.
Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com>
195 lines
8.0 KiB
C++
195 lines
8.0 KiB
C++
// Copyright (c) 2024-2026 Tarik Moussa.
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// SPDX-License-Identifier: MIT
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//
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// Package: conformallab++ / Discrete_conformal_map (Phase 8b-Lite, 2026-05-21)
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/*!
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\file CGAL/Discrete_circle_packing.h
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\ingroup PkgConformalMapRef
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User-facing entry for the **face-based** circle-packing functional of
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Bobenko-Pinkall-Springborn 2010. See `cp_euclidean_functional.hpp`
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for the underlying algorithm and `doc/architecture/phase-9a-validation.md`
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for the line-by-line mapping to the Java original
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`CPEuclideanFunctional.java`.
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This functional has a fundamentally different DOF structure to the
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classical Euclidean / Spherical / HyperIdeal modes — one log-radius
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`ρ_f` per **face** rather than one log-scale `u_v` per vertex. We
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therefore expose it via a dedicated header with its own default-trait
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class (Strategy C of the Phase 8b architecture audit).
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*/
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#ifndef CGAL_DISCRETE_CIRCLE_PACKING_H
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#define CGAL_DISCRETE_CIRCLE_PACKING_H
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#include <CGAL/Conformal_map/internal/parameters.h>
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#include <CGAL/Kernel_traits.h>
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#include <CGAL/Named_function_parameters.h>
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#include <CGAL/boost/graph/named_params_helper.h>
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#include <CGAL/Surface_mesh.h>
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#include <CGAL/Simple_cartesian.h>
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#include <boost/graph/graph_traits.hpp>
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#include "../cp_euclidean_functional.hpp"
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#include "../newton_solver.hpp"
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namespace CGAL {
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// ── Default traits for CP-Euclidean ───────────────────────────────────────────
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/*!
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\ingroup PkgConformalMapConcepts
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\brief Traits class for `discrete_circle_packing_euclidean()` —
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declares the kernel, mesh and property-map types used by the
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BPS-2010 face-based circle-packing functional.
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Primary template; specialise it for non-`Surface_mesh` triangle meshes.
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*/
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template <typename TriangleMesh,
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typename Kernel_ = CGAL::Simple_cartesian<double>>
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struct Default_cp_euclidean_traits;
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/*!
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\ingroup PkgConformalMapConcepts
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\brief Specialisation for `CGAL::Surface_mesh<P>`; the only one shipped
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in Phase 8b-Lite.
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*/
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template <typename K>
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struct Default_cp_euclidean_traits<CGAL::Surface_mesh<typename K::Point_3>, K>
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{
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/// CGAL kernel parameter (defaults to `Simple_cartesian<double>`).
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using Kernel = K;
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/// Scalar field type used for all CP-Euclidean DOFs (`ρ_f`, `θ_e`, `φ_f`).
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using FT = typename K::FT;
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/// 3-D point type (vertex coordinates).
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using Point_3 = typename K::Point_3;
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/// Triangle-mesh type this specialisation targets.
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using Triangle_mesh = CGAL::Surface_mesh<Point_3>;
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/// Boost-graph vertex descriptor for `Triangle_mesh`.
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using Vertex_descriptor = typename boost::graph_traits<Triangle_mesh>::vertex_descriptor;
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/// Boost-graph half-edge descriptor for `Triangle_mesh`.
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using Halfedge_descriptor = typename boost::graph_traits<Triangle_mesh>::halfedge_descriptor;
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/// Boost-graph edge descriptor for `Triangle_mesh`.
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using Edge_descriptor = typename boost::graph_traits<Triangle_mesh>::edge_descriptor;
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/// Boost-graph face descriptor for `Triangle_mesh`.
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using Face_descriptor = typename boost::graph_traits<Triangle_mesh>::face_descriptor;
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// CP-Euclidean property maps — note the *face* DOF index map.
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/// Property map face → contiguous integer DOF index (legacy `cf:idx`).
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using Face_index_pmap = typename Triangle_mesh::template Property_map<Face_descriptor, int>;
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/// Property map edge → intersection angle θₑ (legacy `ce:theta`).
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using Theta_e_pmap = typename Triangle_mesh::template Property_map<Edge_descriptor, FT>;
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/// Property map face → target angle sum φ_f (legacy `cf:phi`).
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using Phi_f_pmap = typename Triangle_mesh::template Property_map<Face_descriptor, FT>;
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};
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// ── Result type ───────────────────────────────────────────────────────────────
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/*!
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\ingroup PkgConformalMapRef
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Result of `discrete_circle_packing_euclidean`. Carries face DOFs
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`ρ_f = log R_f` rather than the vertex DOFs of the classical modes.
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*/
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template <typename FT = double>
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struct Circle_packing_result
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{
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/// Face DOFs `ρ_f = log R_f` (length = num_faces(mesh); pinned face = 0).
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std::vector<FT> rho_per_face;
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/// Newton iterations actually performed (≤ `max_iterations`).
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int iterations = 0;
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/// Final infinity-norm of the gradient (Newton stopping criterion).
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FT gradient_norm = FT(0);
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/// `true` iff `gradient_norm < gradient_tolerance` at exit.
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bool converged = false;
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};
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// ── Entry function ────────────────────────────────────────────────────────────
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/*!
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\ingroup PkgConformalMapRef
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Compute the BPS-2010 face-based circle-packing of `mesh`.
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\tparam TriangleMesh A `CGAL::Surface_mesh<P>`.
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\tparam NamedParameters Optional CGAL named-parameter pack.
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\param mesh Input triangle mesh.
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\param np Named parameters (subset of those documented on
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`discrete_conformal_map_euclidean`; the curvature-map
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parameter `vertex_curvature_map` is **not** used in this
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face-based mode — instead the per-face target angle sum
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`φ_f` and per-edge intersection angle `θ_e` are set via
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the property maps on `mesh` before this call, or left at
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their defaults `φ_f = 2π`, `θ_e = π/2`).
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\returns A `Circle_packing_result<FT>` with `ρ_f` per face.
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\pre `mesh` is a triangle mesh.
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\pre `φ_f` and `θ_e` satisfy the BPS-2010 admissibility conditions
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(Σ_f φ_f = 2π·χ + Σ_e (π − θ_e), see paper §6).
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*/
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template <typename TriangleMesh,
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typename CGAL_NP_TEMPLATE_PARAMETERS>
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auto discrete_circle_packing_euclidean(
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TriangleMesh& mesh,
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const CGAL_NP_CLASS& np = parameters::default_values())
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{
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using Point_type = typename TriangleMesh::Point;
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using Default_kernel = typename CGAL::Kernel_traits<Point_type>::Kernel;
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using Default_traits = Default_cp_euclidean_traits<TriangleMesh, Default_kernel>;
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using Traits = typename internal_np::Lookup_named_param_def<
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internal_np::geom_traits_t,
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CGAL_NP_CLASS,
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Default_traits>::type;
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using FT = typename Traits::FT;
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Circle_packing_result<FT> result;
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auto maps = ::conformallab::setup_cp_euclidean_maps(mesh);
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// Pin first face by default; `fixed_vertex_map` is reused here as the
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// "fixed face" override hook (the parameter tag is generic enough).
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// For a richer API, a dedicated `fixed_face_map` tag could be added.
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auto it = mesh.faces().begin();
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if (it == mesh.faces().end()) {
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return result; // empty mesh; trivial
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}
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const int n = ::conformallab::assign_cp_euclidean_face_dof_indices(mesh, maps, *it);
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const FT tol = parameters::choose_parameter(
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parameters::get_parameter(np, Conformal_map::internal_np::gradient_tolerance),
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FT(1e-10));
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const int max_iter = parameters::choose_parameter(
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parameters::get_parameter(np, Conformal_map::internal_np::max_iterations),
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200);
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// Natural-phi default: shift φ_f so the gradient at ρ = 0 is zero.
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std::vector<double> x0(static_cast<std::size_t>(n), 0.0);
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auto G0 = ::conformallab::cp_euclidean_gradient(mesh, x0, maps);
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for (auto f : mesh.faces()) {
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int i = maps.f_idx[f];
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if (i >= 0) maps.phi_f[f] -= G0[static_cast<std::size_t>(i)];
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}
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auto nr = ::conformallab::newton_cp_euclidean(mesh, x0, maps, tol, max_iter);
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result.rho_per_face.assign(num_faces(mesh), FT(0));
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for (auto f : mesh.faces()) {
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int j = maps.f_idx[f];
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if (j >= 0) result.rho_per_face[f.idx()] = nr.x[static_cast<std::size_t>(j)];
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}
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result.iterations = nr.iterations;
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result.gradient_norm = nr.grad_inf_norm;
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result.converged = nr.converged;
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return result;
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}
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} // namespace CGAL
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#endif // CGAL_DISCRETE_CIRCLE_PACKING_H
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