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ConformalLabpp/Doxyfile
Tarik Moussa 02fb80ee3e
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Phase 7.5: Doxygen infrastructure + Phase 8 design freeze
Adds the Doxygen documentation pipeline as the bridge from Phase 7
(porting complete) to Phase 8 (CGAL package). Also captures the
strategic Phase 8 decisions taken on 2026-05-19.

Infrastructure
──────────────
* Doxyfile         — CGAL-style minimal configuration, HTML-only,
                     INPUT=code/include + doc/, excludes deps/ and
                     macOS Finder duplicates
* code/CMakeLists  — `doc` target via find_package(Doxygen QUIET);
                     silently disabled if Doxygen is not installed
* README           — `cmake --build build --target doc` instructions
* .gitignore       — exclude doc/doxygen/ output

Phase 8 strategic decisions (recorded in doc/api/cgal-package.md)
────────────────────────────────────────────────────────────────
* Submission to CGAL: pre-submission-ready, 12+ months horizon, MIT preserved
* Mesh-type flexibility: generic FaceGraph + HalfedgeGraph
* Parameter style: CGAL Named Parameters
* Default kernel: Simple_cartesian<double> (status quo)
* Architecture: 3-layer wrapper, no algorithm duplication
* Acceptance test: Phase 9a (Inversive-Distance) as first new client

CLAUDE.md updated with a compact Phase 8 decision table.

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
2026-05-19 19:56:22 +02:00

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# Doxyfile for conformallab++
#
# Phase 7.5 — minimal CGAL-style Doxygen configuration.
# Only non-default values are set; Doxygen ≥ 1.9.5 supplies the rest.
#
# Usage:
# doxygen Doxyfile # generates HTML into doc/doxygen/html/
# open doc/doxygen/html/index.html
#
# Or via CMake:
# cmake --build build --target doc
# ── Project identity ─────────────────────────────────────────────────────────
PROJECT_NAME = "conformallab++"
PROJECT_NUMBER = 0.7.0
PROJECT_BRIEF = "Discrete conformal maps on triangle meshes — C++17 reimplementation of ConformalLab (TU Berlin)"
PROJECT_LOGO =
OUTPUT_DIRECTORY = doc/doxygen
USE_MDFILE_AS_MAINPAGE = README.md
# ── Input ────────────────────────────────────────────────────────────────────
INPUT = README.md \
CLAUDE.md \
code/include \
doc/api \
doc/architecture \
doc/math
FILE_PATTERNS = *.hpp *.h *.cpp *.md
RECURSIVE = YES
EXCLUDE_PATTERNS = */build*/* \
*/deps/* \
*/.git/* \
*/test-reports/* \
*/* 2.hpp
EXCLUDE_SYMBOLS = Eigen::* boost::* std::*
# ── Source browsing ──────────────────────────────────────────────────────────
EXTRACT_ALL = YES
EXTRACT_PRIVATE = NO
EXTRACT_STATIC = YES
EXTRACT_LOCAL_CLASSES = YES
HIDE_UNDOC_MEMBERS = NO
SOURCE_BROWSER = YES
INLINE_SOURCES = NO
STRIP_CODE_COMMENTS = NO
REFERENCED_BY_RELATION = YES
REFERENCES_RELATION = YES
REFERENCES_LINK_SOURCE = YES
# ── Build options ────────────────────────────────────────────────────────────
JAVADOC_AUTOBRIEF = YES
QT_AUTOBRIEF = NO
MARKDOWN_SUPPORT = YES
AUTOLINK_SUPPORT = YES
BUILTIN_STL_SUPPORT = YES
DISTRIBUTE_GROUP_DOC = YES
GROUP_NESTED_COMPOUNDS = YES
SUBGROUPING = YES
INLINE_GROUPED_CLASSES = NO
INLINE_SIMPLE_STRUCTS = NO
TYPEDEF_HIDES_STRUCT = NO
EXTENSION_MAPPING = h=C++ hpp=C++
# ── Warnings ─────────────────────────────────────────────────────────────────
QUIET = NO
WARNINGS = YES
WARN_IF_UNDOCUMENTED = NO
WARN_IF_DOC_ERROR = YES
WARN_IF_INCOMPLETE_DOC = YES
WARN_NO_PARAMDOC = NO
WARN_AS_ERROR = NO
WARN_FORMAT = "$file:$line: $text"
WARN_LOGFILE = doc/doxygen/doxygen-warnings.log
# ── HTML output ──────────────────────────────────────────────────────────────
GENERATE_HTML = YES
HTML_OUTPUT = html
HTML_FILE_EXTENSION = .html
HTML_COLORSTYLE = LIGHT
HTML_COLORSTYLE_HUE = 220
HTML_COLORSTYLE_SAT = 100
HTML_COLORSTYLE_GAMMA = 80
HTML_TIMESTAMP = NO
HTML_DYNAMIC_SECTIONS = YES
GENERATE_TREEVIEW = YES
DISABLE_INDEX = NO
ENUM_VALUES_PER_LINE = 1
TREEVIEW_WIDTH = 280
EXT_LINKS_IN_WINDOW = NO
SEARCHENGINE = YES
SERVER_BASED_SEARCH = NO
# ── Disabled outputs (we only want HTML) ─────────────────────────────────────
GENERATE_LATEX = NO
GENERATE_RTF = NO
GENERATE_MAN = NO
GENERATE_XML = NO
GENERATE_DOCBOOK = NO
GENERATE_AUTOGEN_DEF = NO
GENERATE_PERLMOD = NO
# ── Preprocessor ─────────────────────────────────────────────────────────────
ENABLE_PREPROCESSING = YES
MACRO_EXPANSION = YES
EXPAND_ONLY_PREDEF = YES
SEARCH_INCLUDES = YES
INCLUDE_PATH = code/include
PREDEFINED = CGAL_DISABLE_GMP \
CGAL_DISABLE_MPFR \
DOXYGEN_RUNNING
# ── Diagrams ─────────────────────────────────────────────────────────────────
HAVE_DOT = NO
CLASS_GRAPH = YES
COLLABORATION_GRAPH = NO
GROUP_GRAPHS = YES
INCLUDE_GRAPH = NO
INCLUDED_BY_GRAPH = NO
CALL_GRAPH = NO
CALLER_GRAPH = NO
# ── Aliases (CGAL-style) ─────────────────────────────────────────────────────
ALIASES += "concept{1}=\xrefitem concept \"Concept\" \"Concepts\" \1"
ALIASES += "models{1}=\xrefitem models \"Models\" \"Models\" \1"
ALIASES += "cgalRequires{1}=\par Requirements: \n\1"
ALIASES += "cgalParam{2}=\param \1 \2"