Tarik Moussa 1f1e0e82b3 fix(F-15): address Opus review findings (CRITICAL + WARN) ...

CRITICAL:
- cli.py: invert cite-boost formula: divide distance by (1 + alpha*pr)
  instead of multiply — high-PageRank papers now correctly rank higher
- cli.py: wire graph_min_corpus_size config into graph report; warning
  emitted to stderr so JSON stdout stays parseable

WARN:
- graph.py: document that damping is ignored in small-graph uniform branch
- cli.py: sort dangling citations before slicing for stable output
- cli.py: replace raise typer.Exit(0) with return in empty-graph path
- tests: fix *extra_args helper signatures; add cite-boost ordering test
  and small-corpus warning test

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>

2026-06-15 03:40:30 +02:00

..

cli

fix(ingest): D-04 bibkey heuristic + D-05a/b/c regression tests + __main__

2026-06-15 03:07:06 +02:00

discover

feat(discover,provenance): graph discovery queries + @cite scan + code_links + bib export

2026-06-05 07:13:01 +02:00

embed

feat(embed): BGE-M3 dense+sparse via FlagEmbedding (ADR-0002)

2026-06-04 23:48:06 +02:00

graph

fix(F-15): address Opus review findings (CRITICAL + WARN)

2026-06-15 03:40:30 +02:00

ingest

feat(F-16): chunk quality gate + section classification

2026-06-15 01:22:44 +00:00

integration

feat(tests): scaffold + integration smoke tests (config, db, models, pipeline)

2026-06-05 07:40:25 +02:00

mcp

feat(mcp): FastMCP server exposing read-only KB tools (stdio)

2026-06-14 08:55:49 +02:00

parsing

feat(F-09): rich parsing — formula + figure extraction

2026-06-14 01:16:24 +02:00

provenance

feat(discover,provenance): graph discovery queries + @cite scan + code_links + bib export

2026-06-05 07:13:01 +02:00

quality

feat(F-16): chunk quality gate + section classification

2026-06-15 01:22:44 +00:00

scaffold

feat(tests): scaffold + integration smoke tests (config, db, models, pipeline)

2026-06-05 07:40:25 +02:00

sources

fix(sources): resolve arXiv IDs via arXiv DOI (OpenAlex /works/arxiv: 404s)

2026-06-07 23:14:52 +02:00

synthesis

fix(synthesis): enforce non-empty provenance + fix gap lead + clean index docstring

2026-06-14 08:52:35 +02:00

wiki

fix(wiki): sentence-level claim granularity + content-5-gram grounding guard

2026-06-14 05:11:06 +02:00

__init__.py

feat(sources): OpenAlex, SemanticScholar, arXiv API clients

2026-06-04 23:31:15 +02:00