New .gitea/workflows/doxygen-pages.yml runs on every push to main that
touches the public headers, Doxyfile, the markdown-link filter, any
doc/**/*.md, README.md, or the workflow itself. It reuses the existing
ci-cpp container image and the existing CODEBERG_TOKEN secret already
used by mirror-to-codeberg.yml — no new secret setup needed.
The job force-pushes an orphan commit to the `pages` branch on
codeberg.org/TMoussa/ConformalLabpp, which Codeberg Pages serves from
https://tmoussa.codeberg.page/ConformalLabpp/ (verified live).
README.md gains a Doxygen badge and a Documentation table row pointing
at the Pages URL. locked-vs-flexible.md (the reviewer-facing doc) is
updated to mention the Pages URL next to the Doxygen-coverage gap.
Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com>
Doxygen now builds with **0 warnings** (was 27).
Root cause: `[label](doc/api/tests.md)`-style relative markdown links in
README.md and CLAUDE.md were being interpreted by Doxygen as \ref
commands and failed to resolve (Doxygen indexes .md files by basename,
not by repo-relative path).
Fix: add a per-file `FILTER_PATTERNS` to Doxyfile that rewrites
`[label](path/to/file.md)` into `<a href="path/to/file.md">label</a>`
just for Doxygen. HTML anchors bypass \ref resolution entirely; the
generated Doxygen HTML still hyperlinks correctly. The on-disk
markdown is untouched, so GitHub rendering is unaffected.
New file: scripts/doxygen-md-filter.sh (24 lines, documented).
Also: append a "Known limitations (state at the time of the reviewer
meeting)" table to doc/architecture/locked-vs-flexible.md so the
external reviewer sees the 7 deliberate gaps (output_uv_map covers
3 of 5 entries; pipe-only chaining; Phase 9b-analytic derived but not
implemented; Doxygen WARN_IF_UNDOCUMENTED policy; CI test-count gate;
research-track utilities) with effort estimates next to each.
Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com>
- doc/release-policy.md:85 corrected `doc/api/tests.md` link to relative
`api/tests.md` (was resolving to nonexistent doc/doc/api/tests.md).
- doc/tutorials/block-fd-hessian.md:40 redirected stale reference
`../math/hyper-ideal.md` to the actual file `../math/geometry-modes.md`.
Found by a sweep of all doc/*.md before the reviewer meeting.
Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com>
