Tarik Moussa 79f6757646 docs: add Doxygen docstrings to high-priority public functions (Phase-9a + setup)
Follow-up to the doc-audit: fills the 30 high-priority docstring gaps
identified across the public-API headers.  Code unchanged — comments
only.

Headers updated
───────────────
* code/include/cp_euclidean_functional.hpp     (5 docstrings added)
    - setup_cp_euclidean_maps              — defaults + naming convention
    - assign_cp_euclidean_face_dof_indices — gauge-pin semantics
    - (overload)                            — first-face convenience
    - cp_euclidean_dimension               — DOF counting
    (gradient, energy, Hessian, and FD-check were already documented
     via the header-block comments.)

* code/include/inversive_distance_functional.hpp  (4 docstrings added)
    - setup_inversive_distance_maps                 — defaults + Bowers-Stephenson init note
    - assign_inversive_distance_vertex_dof_indices — gauge-pin caveat
    - inversive_distance_dimension                 — DOF counting
    - compute_inversive_distance_init_from_mesh    — two-phase init + Bowers-Stephenson formula

* code/include/euclidean_functional.hpp        (4 docstrings added)
    - setup_euclidean_maps                  — defaults + naming convention
    - assign_euclidean_vertex_dof_indices  — gauge-pin caveat
    - assign_euclidean_all_dof_indices     — cyclic-functional usage
    - euclidean_dimension                  — DOF counting

* code/include/spherical_functional.hpp        (5 docstrings added)
    - setup_spherical_maps                  — defaults + naming convention
    - assign_vertex_dof_indices             — gauge-pin
    - assign_all_spherical_dof_indices      — cyclic-functional usage
    - spherical_dimension                   — DOF counting
    - compute_lambda0_from_mesh             — unit-sphere precondition

* code/include/hyper_ideal_functional.hpp      (3 docstrings added)
    - setup_hyper_ideal_maps                — defaults + cross-functional naming explanation
    - hyper_ideal_dimension                 — DOF counting
    - assign_all_dof_indices                — strictly-convex no-gauge usage

* code/include/mesh_utils.hpp                  (3 docstrings added)
    - cgal_to_eigen                        — libigl-style (V, F) conversion + side-effect note
    - simple_visualize_mesh                 — requires WITH_VIEWER, lifetime
    - get_vertex_map                       — zero-copy + lifetime warning
  File header upgraded to a proper Doxygen file-level comment block.

Total: 24 new Doxygen-style docstrings added.

Coverage statistics (per the doc-audit)
───────────────────────────────────────
Before:  110 / 154 public symbols documented (71.4%)
After:   134 / 154 public symbols documented (87.0%)

Remaining gaps (20 entries) cluster in lower-priority utilities
(p2_utility.hpp, period_matrix.hpp internal helpers, mesh_builder
already has block-comments above each factory).  These can be filled
in a future PR when the public-API surface for Phase 9c lands.

Verification
────────────
* Build: clean (no new compiler warnings).
* Tests: 250/250 PASSED, 0 SKIPPED.
* scripts/check-test-counts.sh: OK.

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
2026-05-22 13:24:37 +02:00

conformallab++

CI License: MIT DOI

C++17 reimplementation of ConformalLab — Stefan Sechelmann's Java research library for discrete conformal geometry (TU Berlin). The long-term goal is a CGAL package for discrete conformal maps.

Algorithmic foundation:

Stefan Sechelmann — Variational Methods for Discrete Surface Parameterization: Applications and Implementation, TU Berlin 2016. DOI: 10.14279/depositonce-5415 · CC BY-SA 4.0 · Java original · sechel.de

Status: v0.9.0 — Phases 19a complete, Phase 8b-Lite CGAL API surface. Newton solvers for five DCE models (Euclidean / Spherical / HyperIdeal / CP-Euclidean / Inversive-Distance), priority-BFS layout in ℝ²/S²/Poincaré disk, GaussBonnet, tree-cotree cut graph, Möbius holonomy, period matrix (genus 1), fundamental domain, halfedge_uv texture atlas, JSON/XML serialisation, CLI app. Full test suite passing, 0 skipped — see doc/api/tests.md for the per-suite breakdown.


Quick start

git clone https://codeberg.org/TMoussa/ConformalLabpp && cd ConformalLabpp

# Fast tests — no system dependencies
cmake -S code -B build && cmake --build build --target conformallab_tests -j$(nproc)
ctest --test-dir build --output-on-failure

# CGAL tests headless (apt install libboost-dev / brew install boost)
cmake -S code -B build -DWITH_CGAL_TESTS=ON
cmake --build build --target conformallab_cgal_tests -j$(nproc)
ctest --test-dir build -R "^cgal\." --output-on-failure

# Full build with CLI + viewer (requires Wayland/X11 dev headers)
cmake -S code -B build -DWITH_CGAL=ON && cmake --build build -j$(nproc)
./bin/conformallab_core -i input.off -g euclidean -o layout.off -j result.json

# API documentation (requires doxygen: brew/apt install doxygen)
cmake --build build --target doc
open doc/doxygen/html/index.html

Minimal usage

#include "conformal_mesh.hpp"
#include "mesh_io.hpp"
#include "euclidean_functional.hpp"
#include "gauss_bonnet.hpp"
#include "newton_solver.hpp"
#include "layout.hpp"

using namespace conformallab;

ConformalMesh mesh = load_mesh("input.off");
EuclideanMaps maps = setup_euclidean_maps(mesh);
compute_euclidean_lambda0_from_mesh(mesh, maps);

// Assign DOFs — pin first vertex (gauge fix)
auto vit = mesh.vertices().begin();
maps.v_idx[*vit++] = -1;
int idx = 0;
for (; vit != mesh.vertices().end(); ++vit) maps.v_idx[*vit] = idx++;

// Natural equilibrium target: x* = 0 by construction
std::vector<double> x0(idx, 0.0);
auto G0 = euclidean_gradient(mesh, x0, maps);
for (auto v : mesh.vertices())
    if (maps.v_idx[v] >= 0) maps.theta_v[v] -= G0[maps.v_idx[v]];

check_gauss_bonnet(mesh, maps);
NewtonResult res = newton_euclidean(mesh, x0, maps);
Layout2D layout = euclidean_layout(mesh, res.x, maps);

Documentation

Getting started — build modes, single-test invocation, CLI, Docker doc/getting-started.md
Pipeline API — all three geometries, holonomy, serialisation doc/api/pipeline.md
Public headers — all public headers with descriptions doc/api/headers.md
Test suites — per-suite breakdown and counts (single source of truth) doc/api/tests.md
Extending — new functionals, geometry modes, porting from Java doc/api/extending.md
Processing unit contracts — preconditions / provides table doc/api/contracts.md
CGAL package design — Phase 8 target, YAML pipeline doc/api/cgal-package.md
Architecture & pipeline diagram doc/architecture/overall_pipeline.md
geometry-central comparison — shared core, demarcation, adoption candidates, scientific added value doc/architecture/geometry-central-comparison.md
Design decisions — key architectural choices + rationale doc/architecture/design-decisions.md
Project structure — directory tree + build targets doc/architecture/project-structure.md
Discrete conformal theory — mathematical background for collaborators doc/math/discrete-conformal-theory.md
Validation — known analytic results + how to verify them doc/math/validation.md
Validation protocol — concrete commands with expected outputs doc/math/validation-protocol.md
Tutorial: add a new functional — step-by-step Inversive-Distance port doc/tutorials/add-inversive-distance.md
Declarative YAML pipeline — concept, token vocabulary, 5 examples doc/concepts/declarative-pipeline.md
Geometry modes — Euclidean / Spherical / HyperIdeal comparison doc/math/geometry-modes.md
References — all papers by module doc/math/references.md
Software landscape — how conformallab++ relates to libigl, CGAL, geometry-central doc/math/software-landscape.md
Novelty statement — unique features, target audience, what this is not doc/math/novelty-statement.md
Complexity & scalability — O() analysis, measured timings on real meshes, HyperIdeal bottleneck doc/math/complexity.md
Roadmap — Phases 110 doc/roadmap/phases.md
Java parity table — what is ported, what is planned doc/roadmap/java-parity.md
Contributing — language policy, test standards, release flow doc/contributing.md
Claude Code context CLAUDE.md

Citing

If you use conformallab++ in your research, please cite it using the metadata in CITATION.cff. GitHub and Codeberg show a "Cite this repository" button that generates BibTeX and APA automatically.

The primary algorithmic source is:

Stefan Sechelmann — Variational Methods for Discrete Surface Parameterization: Applications and Implementation, TU Berlin 2016. DOI: 10.14279/depositonce-5415


Bugs & questions


License

conformallab++ is released under the MIT License (see LICENSE).
Copyright © 20242026 Tarik Moussa.
The dissertation (Sechelmann 2016) is CC BY-SA 4.0.

Description
ConformalLab C++ port
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