feat(quality): store real section titles for .tex chunks (R-F)

Add quality.section_label(title, content): for section-aware .tex ingest, keep the controlled bucket (intro/theorem/proof/abstract/bibliography) when the real \section heading maps to one, else store the cleaned title verbatim (e.g. 'preliminaries', 'rigidity') instead of collapsing to 'body'. Math papers title most sections descriptively, so R-C's vocab-only mapping left ~90% as 'body'; this lifts the section signal toward near-full. .pdf/.txt/run_quality_pass keep content-based classify_section unchanged. Safe because the section column is write-only (no consumer filters on the vocab).

New _clean_title (strip LaTeX/numbering, lower-case, truncate). Tests: section_label bucket/verbatim/fallback paths + _clean_title; .tex ingest stores a descriptive heading as its title. Full suite 377 passed; ruff + mypy clean.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
This commit is contained in:
Tarik Moussa
2026-06-18 09:03:46 +02:00
parent c22c0db3d0
commit c70ff9aa1e
4 changed files with 82 additions and 7 deletions

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@@ -12,7 +12,7 @@ from codex.config import get_settings
from codex.db import get_conn
from codex.embed import get_embedder
from codex.models import Citation, Paper
from codex.quality import classify_section, is_quality_chunk
from codex.quality import is_quality_chunk, section_label
from codex.sources import arxiv, crossref, openalex, semanticscholar
logger = logging.getLogger(__name__)
@@ -312,10 +312,11 @@ def ingest_paper(
ord_idx,
content,
chunk_embeddings[ord_idx].tolist(),
# .tex: classify from the section heading (prepended to the
# snippet) so the label reflects the real section; otherwise
# fall back to content-only classification.
classify_section(f"{title}. {content}" if title else content),
# .tex: label from the real \section heading — keeps the
# controlled bucket when it matches, else stores the cleaned
# title (R-F); .txt/.pdf (title=None) classify by content.
# NB: `section` semantics now differ by source (write-only col).
section_label(title, content),
)
for ord_idx, (title, content) in enumerate(kept_pairs)
]

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@@ -110,6 +110,42 @@ def classify_section(text: str) -> str:
return "body"
def _clean_title(title: str) -> str:
"""Normalize a LaTeX ``\\section`` title for use as a section label.
Strips LaTeX commands (``\\emph`` …) and ``{}$``, drops leading section
numbering (``3.2 ``), collapses whitespace, lower-cases, and truncates to
60 chars so the stored ``section`` value is a clean, comparable string.
"""
t = re.sub(r"\\[a-zA-Z]+\*?", " ", title) # LaTeX commands
t = re.sub(r"[{}$]", "", t) # braces / math delimiters
t = re.sub(r"^\s*\d+(?:\.\d+)*\.?\s*", "", t) # leading numbering "3.2 "
return " ".join(t.split()).strip().lower()[:60]
def section_label(title: str | None, content: str) -> str:
"""Label a chunk's section, preferring the real ``\\section`` heading (R-F).
For section-aware ``.tex`` ingest *title* is the real heading: if it maps to a
controlled bucket via :func:`classify_section` (intro / theorem / proof /
abstract / bibliography) that bucket is kept (cross-source consistency);
otherwise the cleaned title itself is stored (e.g. ``"preliminaries"``,
``"rigidity"``) — far more signal than collapsing everything to ``body``.
When *title* is None / blank (the ``.pdf`` / ``.txt`` / ``run_quality_pass``
paths) this falls back to content-based :func:`classify_section` — unchanged
behaviour. Safe to store free-text titles because the ``section`` column is
write-only (no consumer filters on the controlled vocabulary).
"""
if not title or not title.strip():
return classify_section(content)
cleaned = _clean_title(title)
if not cleaned:
return classify_section(content)
bucket = classify_section(cleaned)
return bucket if bucket != "body" else cleaned
# ---------------------------------------------------------------------------
# Batch filter
# ---------------------------------------------------------------------------

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@@ -128,6 +128,7 @@ def test_ingest_paper_source_tex(tmp_path: Any) -> None:
section_pairs = [
("Introduction", "Body of the introduction goes here."),
("Proof of the Main Theorem", "Body of the proof goes here."),
("3.2 Discrete Conformal Maps", "Body about discrete conformal maps."),
]
with (
@@ -151,9 +152,11 @@ def test_ingest_paper_source_tex(tmp_path: Any) -> None:
chunk_sql: str = chunk_insert_call[0][0]
assert "INSERT INTO chunks" in chunk_sql
# Section label comes from the heading: "Introduction"intro, "Proof of…" → proof.
# R-F: heading → controlled bucket where it maps ("Introduction"intro,
# "Proof of…"→proof), else the cleaned real title ("discrete conformal maps")
# instead of collapsing to "body".
chunk_rows = chunk_insert_call[0][1]
assert [row[4] for row in chunk_rows] == ["intro", "proof"]
assert [row[4] for row in chunk_rows] == ["intro", "proof", "discrete conformal maps"]
assert result.chunks_upserted == len(section_pairs)

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@@ -6,10 +6,12 @@ from unittest.mock import MagicMock
from codex.quality import (
_bib_score,
_clean_title,
classify_section,
filter_chunks,
is_quality_chunk,
run_quality_pass,
section_label,
)
# ---------------------------------------------------------------------------
@@ -243,3 +245,36 @@ class TestRunQualityPass:
kwargs = update_calls[0][0][1]
assert kwargs["section"] == "abstract"
assert kwargs["id"] == 5
class TestCleanTitle:
def test_strips_leading_numbering(self):
assert _clean_title("3.2 Variational Principles") == "variational principles"
def test_strips_latex_and_braces(self):
assert _clean_title(r"The \emph{Discrete} Laplacian") == "the discrete laplacian"
def test_collapses_and_lowercases(self):
assert _clean_title(" Rigidity Results ") == "rigidity results"
class TestSectionLabel:
def test_title_maps_to_controlled_bucket(self):
# Headings matching the controlled vocab keep the canonical bucket.
assert section_label("Introduction", "body text") == "intro"
assert section_label("Proof of Theorem 3", "body text") == "proof"
assert section_label("References", "body text") == "bibliography"
def test_descriptive_title_stored_verbatim(self):
# R-F win: a non-vocab heading is stored as its cleaned title, not "body".
assert section_label("Preliminaries", "body text") == "preliminaries"
assert section_label("3.1 Discrete Conformal Maps", "x") == "discrete conformal maps"
def test_none_or_blank_title_falls_back_to_content(self):
# .pdf/.txt path: unchanged content-based classification.
assert section_label(None, "Theorem 1. Let X be ...") == "theorem"
assert section_label("", "ordinary body prose here") == "body"
def test_title_cleaning_to_empty_falls_back_to_content(self):
# A pure-numbering heading cleans to "" → classify by content instead.
assert section_label("3.2", "Lemma 2. Suppose ...") == "theorem"