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6e05fdc209
docs: Cold-Start-Prompt fuer Evaluate/Review/Release ergaenzt
2026-07-31 01:34:11 +02:00
15b782fa8d
Merge pull request 'chore: interne Host-Adresse durch generischen Hostnamen ersetzt' (#17 ) from chore/scrub-private-ip into main
user2595
2026-07-30 22:52:58 +00:00
53c40f6da2
chore: interne Host-Adresse durch generischen Hostnamen ersetzt
2026-07-31 00:51:27 +02:00
5aa2f7db40
Merge PR #16 : data-quality roadmap R-A–R-F + DQ-5 (reconciled, reviewed)
user2595
2026-06-27 07:12:29 +00:00
ab621fc5f5
test(review): cover findings #1 (non-bare caller id) and #4 (backfill connection scope)
2026-06-27 09:09:39 +02:00
b2f01ce010
fix(review): address PR #16 code-review findings
2026-06-26 22:50:23 +02:00
9e5184385a
merge: reconcile data-quality roadmap with audit-remediation main (#12-15)
2026-06-22 15:11:26 +02:00
e817022097
docs: mark integration/roadmap merge-ready (391 green) + cleanup notes
2026-06-22 02:01:38 +02:00
2d78f9c48e
merge: infra TODO — tmux-on-Jetson SSH stability
2026-06-22 01:59:48 +02:00
6911f0065e
merge: R-D (citing-coverage warning in graph report)
2026-06-22 01:59:48 +02:00
aaa86dee2f
merge: R-B (Crossref references as third citation fallback)
2026-06-22 01:59:02 +02:00
42608c73b8
merge: R-C (.tex ingest) + R-F (section labels) + DQ-5 arXiv fix
2026-06-22 01:58:43 +02:00
49c251eafa
docs: open-items — Jetson back (tunnel had dropped), R-F accent re-clean done
2026-06-22 01:54:32 +02:00
f761ee63f8
docs(audit): R-F accent re-clean done — 8 labels fixed in place, 0 artifacts remain
2026-06-22 01:53:36 +02:00
200b7f8188
docs: session 2026-06-17 open-items handoff notice
2026-06-22 01:48:47 +02:00
a050f6622a
docs(infra): TODO — tmux-on-Jetson + autossh for stable long-running ops
2026-06-18 09:32:03 +02:00
5c60a7eda4
docs(audit): add R-F (richer section labels) resolution — 10% to 95% non-body
2026-06-18 09:25:03 +02:00
1a879d4827
feat(quality): clean LaTeX accents/ties + word-boundary truncation in section titles
2026-06-18 09:17:43 +02:00
c70ff9aa1e
feat(quality): store real section titles for .tex chunks (R-F)
2026-06-18 09:03:46 +02:00
5672358bbe
feat(graph): warn on low citing-paper coverage in graph report (R-D)
2026-06-18 07:59:25 +02:00
c22c0db3d0
docs(audit): mark R-C done (section-aware .tex ingest + DQ-5 arXiv half)
2026-06-18 07:47:43 +02:00
f504ca62db
fix(openalex): canonicalize arXiv DOI to bare arXiv id (DQ-5 arXiv half)
2026-06-18 04:25:22 +02:00
121b582f46
fix(arxiv): handle legacy single-file gzipped source (no tar wrapper)
2026-06-18 04:18:18 +02:00
1da81c7b28
feat(tex): section-aware multi-file .tex ingest (R-C)
2026-06-18 04:15:20 +02:00
bf90c6cd57
feat(grobid): run GROBID on-demand (restart "no") to free ~3.5GB when idle
2026-06-17 21:36:04 +02:00
82cea2a33b
feat(crossref): reference extraction as third citation fallback (R-B)
2026-06-17 21:32:46 +02:00
1516684bbb
feat(grobid): R-A reference backfill + native arm64 GROBID on Jetson
2026-06-17 08:28:34 +02:00
b55aa5b429
chore: gitignore generated wiki/index.md
2026-06-17 00:42:37 +02:00
0021859094
fix(ingest): normalize GROBID-derived citation DOIs to bare lower-case
2026-06-17 00:39:04 +02:00
b371119264
docs(audit): scope DQ-3 to txt→chunks + open DQ-6 (PDF→txt extraction fidelity)
2026-06-17 00:33:45 +02:00
ea73b1475c
fix(openalex): normalize DOI to bare canonical id so re-ingest is idempotent (DQ-5)
2026-06-17 00:31:01 +02:00
fa43f69dfd
docs(audit): DQ-3 content fidelity verified clean — assessment axis complete
2026-06-17 00:23:16 +02:00
ff03443af4
feat(ingest): recover missing metadata + abstracts from arXiv/S2/Crossref (DQ-2)
2026-06-17 00:12:59 +02:00
51dc74470c
feat(ingest): supplement citations from Semantic Scholar when OpenAlex is empty (DQ-1)
2026-06-16 23:51:48 +02:00
553ae3995d
fix(search): cast query embedding to ::vector in search paper (DQ-4)
2026-06-16 23:51:38 +02:00
d64edfc324
Merge pull request 'fix: audit remediation Wave 3 — M-1, MED/LOW sweep, ingest robustness + D-1 close-out' (#14 ) from fix/audit-wave-3 into main
user2595
2026-06-16 04:53:59 +00:00
07929bd4fe
Merge pull request 'fix: audit remediation Wave 2 — identity normalization C-7, C-10 (+ T-3, ADR D-1)' (#13 ) from fix/audit-wave-2 into main
user2595
2026-06-16 04:53:40 +00:00
dca0dd793f
Merge pull request 'fix: audit remediation Wave 1 — correctness fixes C-1, C-4, C-11 (+ doc fixes)' (#12 ) from fix/audit-wave-1 into main
user2595
2026-06-16 04:53:19 +00:00
fb06c6f65a
Merge pull request 'docs+chore: audit findings + tooling (base of the remediation stack)' (#15 ) from audit/loop-1 into main
user2595
2026-06-16 04:52:58 +00:00
64e3ee188c
docs(audit): data-quality findings + handoff for a fresh session
2026-06-15 22:45:05 +02:00
e1c0a98262
fix(ingest): make both upsert UNIQUE gaps visible (audit C-15 follow-up)
2026-06-15 22:25:30 +02:00
1f677211f7
docs(adr): finalise D-1 — re-measure F-15 spike on canonical corpus
2026-06-15 22:13:56 +02:00
b52303d22b
fix(ingest): retry on bibkey UNIQUE collision (audit C-15)
2026-06-15 22:11:14 +02:00
45c3b16dd7
docs: clarify sparse-not-wired and cite-boost tie-breaker (audit C-14, U-2)
2026-06-15 21:47:40 +02:00
f422b0fb84
fix(wiki): token-boundary grounding match + sharper ref-list filter (C-6, R-2)
2026-06-15 21:46:02 +02:00
92928bab99
feat(cli): graph-report titles + JSON warning; wire recommend/cocited (U-1,U-3,U-4,C-9)
2026-06-15 21:43:19 +02:00
c7fae5c877
fix(sources): drop no-op try/except + url-encode S2 ids (audit R-4, R-5)
2026-06-15 21:39:48 +02:00
b4fbd7930e
feat(config): wrap credentials in SecretStr (audit S-4)
2026-06-15 21:32:13 +02:00
e7b854db10
fix(wiki): make grounding tokenizer robust to punctuation (audit R-1)
2026-06-15 16:37:30 +02:00
77f9d79da0
fix(mcp): real cited bibkeys in wiki_read + constant-time token compare
2026-06-15 16:34:28 +02:00
c4106b0f51
fix(synthesis): make coverage-map gaps opt-in (audit R-8)
2026-06-15 16:32:01 +02:00
cfbfa53398
fix(wiki): protect math in cross-refs; drop no-op DB call; fix mark order
2026-06-15 16:24:22 +02:00
ae5e9a528b
docs: document 'codex migrate' + MIGRATION_DATABASE_URL as the schema-sync path
2026-06-15 16:20:54 +02:00
10ff5ba3ab
chore(infra): point migration helper preflight at 'codex migrate'
2026-06-15 15:54:25 +02:00
cdb7d254df
feat(db): idempotent schema + 'codex migrate' command (audit M-1, T-2)
2026-06-15 15:53:25 +02:00
b4cf924bf1
docs(audit): record M-1 migration incident + privilege dimension
2026-06-15 15:45:39 +02:00
9f172f5c68
fix(infra): preflight schema check before TRUNCATE in migration helper
2026-06-15 15:37:35 +02:00
1ff8052b69
chore(infra): add canonical-id re-ingest migration helper (audit C-7)
2026-06-15 12:17:17 +02:00
ce75bc02e5
docs(adr): audit addendum to ADR-F15 — ID mismatch resolved (audit D-1)
2026-06-15 12:10:46 +02:00
8e2f9e037d
fix(ingest): key formulas/figures on papers.id, not filename stem (audit C-10)
2026-06-15 12:09:38 +02:00
c36e7c6ee7
fix(ingest): canonicalise papers.id to the caller id (audit C-7, T-3)
2026-06-15 12:06:53 +02:00
6193f5630d
docs: fix two doc/code contradictions (audit D-2, D-4)
2026-06-15 11:13:52 +02:00
eee147275a
fix(discover): resolve cited_id via shared resolver (audit C-1)
2026-06-15 11:12:55 +02:00
3092f1814e
fix(synthesis): namespace lead ids by kind to stop collisions (audit C-11)
2026-06-15 11:09:24 +02:00
115bb63f2d
fix(wiki): quarantine zero-citation pages instead of publishing (audit C-4)
2026-06-15 11:06:12 +02:00
8af9f9ad0a
docs(audit): runtime-validate C-4 & C-11, close nougat.py review
2026-06-15 10:57:24 +02:00
33fb91d478
docs(audit): live-DB verification — confirm C-7 & C-1, refine M-1
2026-06-15 10:40:46 +02:00
2d1b0b5e23
docs(audit): complete whole-repo audit (parts D-G + exec summary)
2026-06-15 10:14:50 +02:00
7682ff112f
docs(audit): whole-repo audit parts A-C (grounding, sources, parsing)
2026-06-15 09:23:56 +02:00
a0ad069b1d
docs(audit): record development-loop-1 findings
2026-06-15 08:43:54 +02:00
0c89eebeb8
chore(ops): ignore .env.* profiles + add batch ingest script
2026-06-15 08:43:53 +02:00
9726042964
style: ruff format normalization to line-length=100
2026-06-15 08:43:53 +02:00
5dfa6e4bae
feat(graph): paper_identifiers table — multi-ID alias support
2026-06-15 07:42:21 +02:00
664600fdc7
fix(graph): resolve cited_id to papers.id via openalex_id JOIN
2026-06-15 07:15:21 +02:00
a1a6f4590b
docs(adr): ADR-F15 literature graph — GO, Bobenko+Springborn rank 7
2026-06-15 07:11:37 +02:00
52d49dcfc6
docs(adr): ADR-F15 literature graph — GO, Bobenko+Springborn rank 7
2026-06-15 07:11:37 +02:00
2c476dc038
Merge pull request 'feat(F-15): citation graph — PageRank, coupling, co-citation, CLI' (#11 ) from feat/F-15-literature-graph into main
user2595
2026-06-15 03:18:22 +00:00
1f1e0e82b3
fix(F-15): address Opus review findings (CRITICAL + WARN)
2026-06-15 03:40:30 +02:00
fd51b70000
feat(F-15): citation graph — PageRank, coupling, co-citation, CLI
2026-06-15 03:31:36 +02:00
9647897173
feat(F-16): chunk quality gate + section classification
user2595
2026-06-15 01:22:44 +00:00
b61d84d4bd
feat(F-16): chunk quality gate + section classification
2026-06-15 03:22:11 +02:00
1a9afb4433
Merge pull request 'fix(ingest): D-04 bibkey heuristic + D-05a/b/c regression tests + __main__' (#9 ) from fix/d04-d05-ingest-fixes into main
user2595
2026-06-15 01:07:35 +00:00
b87087d3c6
fix(ingest): D-04 bibkey heuristic + D-05a/b/c regression tests + __main__
2026-06-15 03:07:06 +02:00
335ca2c923
docs(adr): ADR-F13 synthesis engine — GO + zero-fact-leak enforcement (N-02)
2026-06-15 01:54:53 +02:00
36a5d9566a
Merge pull request 'fix(docs): correct provenance CLI command names in README (D-01)' (#8 ) from fix/cli-readme-drift into main
user2595
2026-06-14 23:51:07 +00:00
b12789a47f
fix(docs): correct provenance CLI command names in README (D-01)
2026-06-15 00:49:50 +02:00
1bec18ae82
Merge pull request 'fix(ingest): support .txt sources + fix citing_id FK violation' (#7 ) from fix/ingest-txt-and-citing-id into main
user2595
2026-06-14 13:56:04 +00:00
5025ff3a88
fix(ingest): support .txt sources + fix citing_id FK violation
2026-06-14 15:54:05 +02:00
6c28446644
Merge pull request 'fix(mcp): disable DNS rebinding protection for LAN HTTP transport' (#6 ) from fix/mcp-transport-security into main
user2595
2026-06-14 12:55:59 +00:00
d29dcf2fb5
fix(mcp): disable DNS rebinding protection for LAN HTTP transport
2026-06-14 14:55:29 +02:00
1d1203b225
Merge pull request 'fix(sources): resolve arXiv IDs via arXiv DOI (OpenAlex /works/arxiv: 404s)' (#5 ) from fix/openalex-arxiv-doi into main
user2595
2026-06-14 12:31:33 +00:00
50e6bb8210
fix(config): remove duplicate F-13 settings block (merge artefact)
2026-06-14 08:59:05 +02:00
b2ef8f2575
docs(mcp): client registration (Claude Code / Desktop)
2026-06-14 08:23:34 +02:00
b803811701
feat(mcp): FastMCP server exposing read-only KB tools (stdio)
2026-06-14 08:23:22 +02:00
59763105a5
fix(synthesis): enforce non-empty provenance + fix gap lead + clean index docstring
2026-06-14 08:52:35 +02:00
8cf0cc7e01
feat(synthesis): Lead/Provenance model + grounded leads + conjecture generator
2026-06-14 08:37:42 +02:00
967e6baa59
feat(wiki): ADR-F12-wiki-compile.md — GO decision + grounding measurement
2026-06-14 03:54:42 +02:00
7d338d29ca
fix(wiki): sentence-level claim granularity + content-5-gram grounding guard
2026-06-14 03:53:39 +02:00
408e4886bb
fix(wiki): basic conflict detection in CompileReport
2026-06-14 03:51:30 +02:00
ef46d14aed
fix(wiki): protect inline-code spans from cross-ref injection
2026-06-14 03:49:06 +02:00
Tarik Moussa
user2595